Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APAF1O14727 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.99■□□□□ 0.95
APAF1O14727 AC074338.1-201ENST00000416825 156 ntBASIC20.99■□□□□ 0.95
APAF1O14727 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 IGHV3-42-201ENST00000520410 361 ntBASIC20.99■□□□□ 0.95
APAF1O14727 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.99■□□□□ 0.95
APAF1O14727 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.99■□□□□ 0.95
APAF1O14727 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
APAF1O14727 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
APAF1O14727 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
APAF1O14727 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.99■□□□□ 0.95
APAF1O14727 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
APAF1O14727 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
APAF1O14727 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
APAF1O14727 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 AC009090.5-201ENST00000624886 2285 ntBASIC20.98■□□□□ 0.95
APAF1O14727 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.98■□□□□ 0.95
APAF1O14727 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
APAF1O14727 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.98■□□□□ 0.95
APAF1O14727 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.98■□□□□ 0.95
APAF1O14727 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.98■□□□□ 0.95
APAF1O14727 AC136604.1-201ENST00000418535 575 ntBASIC20.98■□□□□ 0.95
APAF1O14727 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.98■□□□□ 0.95
APAF1O14727 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.98■□□□□ 0.95
APAF1O14727 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.98■□□□□ 0.95
APAF1O14727 TARDBPP1-201ENST00000442013 1203 ntBASIC20.98■□□□□ 0.95
APAF1O14727 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.98■□□□□ 0.95
APAF1O14727 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.98■□□□□ 0.95
APAF1O14727 AC025048.3-201ENST00000590609 569 ntBASIC20.98■□□□□ 0.95
APAF1O14727 AC005702.4-201ENST00000618393 416 ntBASIC20.98■□□□□ 0.95
APAF1O14727 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
APAF1O14727 AC087499.5-201ENST00000452760 1342 ntBASIC20.98■□□□□ 0.95
APAF1O14727 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
APAF1O14727 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.98■□□□□ 0.95
APAF1O14727 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.98■□□□□ 0.95
APAF1O14727 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.97■□□□□ 0.95
APAF1O14727 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.97■□□□□ 0.95
APAF1O14727 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.97■□□□□ 0.95
APAF1O14727 AC241585.1-201ENST00000433527 519 ntBASIC20.97■□□□□ 0.95
APAF1O14727 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.97■□□□□ 0.95
APAF1O14727 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.97■□□□□ 0.95
APAF1O14727 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.97■□□□□ 0.95
APAF1O14727 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.97■□□□□ 0.95
APAF1O14727 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.97■□□□□ 0.95
APAF1O14727 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.97■□□□□ 0.95
APAF1O14727 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.97■□□□□ 0.95
APAF1O14727 MIR6069-201ENST00000620069 79 ntBASIC20.97■□□□□ 0.95
APAF1O14727 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.97■□□□□ 0.95
APAF1O14727 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.97■□□□□ 0.95
APAF1O14727 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
APAF1O14727 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APAF1O14727 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.97■□□□□ 0.95
APAF1O14727 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
APAF1O14727 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APAF1O14727 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.96■□□□□ 0.95
APAF1O14727 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.96■□□□□ 0.95
APAF1O14727 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
APAF1O14727 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APAF1O14727 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.96■□□□□ 0.95
APAF1O14727 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.96■□□□□ 0.95
APAF1O14727 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.96■□□□□ 0.95
APAF1O14727 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
APAF1O14727 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
APAF1O14727 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
APAF1O14727 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms