Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIP1O00291 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HIP1O00291 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HIP1O00291 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HIP1O00291 AC136604.1-201ENST00000418535 575 ntBASIC19.23■□□□□ 0.67
HIP1O00291 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.23■□□□□ 0.67
HIP1O00291 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.23■□□□□ 0.67
HIP1O00291 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.23■□□□□ 0.67
HIP1O00291 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.23■□□□□ 0.67
HIP1O00291 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.23■□□□□ 0.67
HIP1O00291 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.23■□□□□ 0.67
HIP1O00291 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.23■□□□□ 0.67
HIP1O00291 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
HIP1O00291 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HIP1O00291 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIP1O00291 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.23■□□□□ 0.67
HIP1O00291 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIP1O00291 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
HIP1O00291 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIP1O00291 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.23■□□□□ 0.67
HIP1O00291 TUBB3P1-201ENST00000405796 1332 ntBASIC19.23■□□□□ 0.67
HIP1O00291 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIP1O00291 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIP1O00291 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.23■□□□□ 0.67
HIP1O00291 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
HIP1O00291 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.22■□□□□ 0.67
HIP1O00291 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.22■□□□□ 0.67
HIP1O00291 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.22■□□□□ 0.67
HIP1O00291 HIST3H2BA-201ENST00000436555 524 ntBASIC19.22■□□□□ 0.67
HIP1O00291 SERBP1P3-201ENST00000459980 809 ntBASIC19.22■□□□□ 0.67
HIP1O00291 HLA-V-204ENST00000476601 1289 ntBASIC19.22■□□□□ 0.67
HIP1O00291 AC067863.1-201ENST00000494933 530 ntBASIC19.22■□□□□ 0.67
HIP1O00291 AC097359.3-201ENST00000603982 1210 ntBASIC19.22■□□□□ 0.67
HIP1O00291 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.22■□□□□ 0.67
HIP1O00291 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HIP1O00291 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.22■□□□□ 0.67
HIP1O00291 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.22■□□□□ 0.67
HIP1O00291 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HIP1O00291 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HIP1O00291 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIP1O00291 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.21■□□□□ 0.67
HIP1O00291 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 AL080243.2-201ENST00000418783 582 ntBASIC19.21■□□□□ 0.67
HIP1O00291 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.21■□□□□ 0.67
HIP1O00291 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.21■□□□□ 0.67
HIP1O00291 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
HIP1O00291 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.21■□□□□ 0.67
HIP1O00291 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIP1O00291 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIP1O00291 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIP1O00291 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HIP1O00291 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
HIP1O00291 AC020658.6-201ENST00000623564 1870 ntBASIC19.2■□□□□ 0.66
HIP1O00291 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIP1O00291 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms