Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 AP001282.1-201ENST00000531301 1499 ntBASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.9■□□□□ 0.14
TBC1D3FA6NER0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TBC1D3FA6NER0 AC134407.2-201ENST00000625089 1978 ntBASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 RN7SL837P-201ENST00000463010 287 ntBASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 TMEM261P1-201ENST00000604899 340 ntBASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 MIR8072-201ENST00000614241 80 ntBASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TBC1D3FA6NER0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 TARDBPP1-201ENST00000442013 1203 ntBASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 RN7SL399P-201ENST00000471648 279 ntBASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 WFDC1-204ENST00000613603 549 ntBASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TBC1D3FA6NER0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AC006449.6-201ENST00000612330 2296 ntBASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 TTTY23B-201ENST00000442790 549 ntBASIC15.87■□□□□ 0.13
TBC1D3FA6NER0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms