Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 AC084364.1-201ENST00000551967 1556 ntBASIC23.29■■□□□ 1.32
HFM1A2PYH4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 LINC02199-201ENST00000506655 2702 ntBASIC23.29■■□□□ 1.32
HFM1A2PYH4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 AC007389.4-201ENST00000454674 793 ntBASIC23.29■■□□□ 1.32
HFM1A2PYH4 GPR53P-205ENST00000457298 1084 ntBASIC23.29■■□□□ 1.32
HFM1A2PYH4 AC011495.1-201ENST00000498085 584 ntBASIC23.29■■□□□ 1.32
HFM1A2PYH4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC23.29■■□□□ 1.32
HFM1A2PYH4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HFM1A2PYH4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 C1QBPP1-201ENST00000400117 770 ntBASIC23.28■■□□□ 1.32
HFM1A2PYH4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 AC134915.1-201ENST00000426461 574 ntBASIC23.28■■□□□ 1.32
HFM1A2PYH4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC23.28■■□□□ 1.32
HFM1A2PYH4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HFM1A2PYH4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 AC106886.1-201ENST00000568660 600 ntBASIC23.27■■□□□ 1.32
HFM1A2PYH4 CLUHP6-201ENST00000580789 941 ntBASIC23.27■■□□□ 1.32
HFM1A2PYH4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
HFM1A2PYH4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HFM1A2PYH4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC23.27■■□□□ 1.31
HFM1A2PYH4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC23.26■■□□□ 1.31
HFM1A2PYH4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC23.26■■□□□ 1.31
HFM1A2PYH4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC23.26■■□□□ 1.31
HFM1A2PYH4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC23.26■■□□□ 1.31
HFM1A2PYH4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC23.26■■□□□ 1.31
HFM1A2PYH4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC23.26■■□□□ 1.31
HFM1A2PYH4 AC025181.2-201ENST00000606994 802 ntBASIC23.26■■□□□ 1.31
HFM1A2PYH4 CU634019.7-201ENST00000624153 1185 ntBASIC23.26■■□□□ 1.31
HFM1A2PYH4 FP236241.2-201ENST00000624906 1185 ntBASIC23.26■■□□□ 1.31
HFM1A2PYH4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HFM1A2PYH4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms