Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 AC144831.1-201ENST00000573312 2656 ntBASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HLA-DRB4X5D2U9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AP002414.2-201ENST00000591780 3365 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 HTR5BP-201ENST00000430851 1154 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 SPDYE11-202ENST00000450699 704 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 SPDYE9P-201ENST00000570642 692 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AC073389.1-201ENST00000595595 795 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AC026120.1-201ENST00000611536 926 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 SPDYE10P-202ENST00000612005 668 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 SPDYE8P-202ENST00000612377 668 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 AC008267.7-201ENST00000624570 1194 ntBASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HLA-DRB4X5D2U9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-DRB4X5D2U9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms