Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 AC078925.2-201ENST00000624013 1973 ntBASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 DOC2GP-204ENST00000639052 2548 ntBASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 AC104596.2-201ENST00000512793 793 ntBASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 CTBP2P3-201ENST00000585629 1255 ntBASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSNK1G3Q9Y6M4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CSNK1G3Q9Y6M4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
CSNK1G3Q9Y6M4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
CSNK1G3Q9Y6M4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 RN7SL837P-201ENST00000463010 287 ntBASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 AC017083.2-201ENST00000608069 979 ntBASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms