Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 POM121L3P-201ENST00000419331 1163 ntBASIC15.2■□□□□ 0.02
AP4S1Q9Y587 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 AC005412.3-201ENST00000580309 715 ntBASIC15.2■□□□□ 0.02
AP4S1Q9Y587 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 AL121672.3-201ENST00000608644 468 ntBASIC15.2■□□□□ 0.02
AP4S1Q9Y587 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 PI4KAP1-204ENST00000612579 1703 ntBASIC15.2■□□□□ 0.02
AP4S1Q9Y587 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP4S1Q9Y587 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 C8orf49-201ENST00000525043 1968 ntBASIC15.19■□□□□ 0.02
AP4S1Q9Y587 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 AC107918.2-201ENST00000530817 355 ntBASIC15.19■□□□□ 0.02
AP4S1Q9Y587 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4S1Q9Y587 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.18■□□□□ 0.02
AP4S1Q9Y587 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms