Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AC010327.4-202ENST00000591484 748 ntBASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AL592424.1-201ENST00000563624 1536 ntBASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AC006449.6-201ENST00000612330 2296 ntBASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 AC079140.1-201ENST00000508039 487 ntBASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 KRT8P48-201ENST00000515599 1220 ntBASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 MIR4469-201ENST00000583919 79 ntBASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 AC027307.2-201ENST00000591252 911 ntBASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 AC105339.1-204ENST00000636249 355 ntBASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAPPC4Q9Y296 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 MIR346-201ENST00000362234 95 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 TIMM8BP1-201ENST00000452384 211 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AC098859.1-201ENST00000502915 1238 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 LINC01225-203ENST00000563550 1244 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AL138918.1-201ENST00000568306 659 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AL365330.1-201ENST00000607459 531 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AC084121.4-201ENST00000641598 221 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 AF228730.8-201ENST00000642140 221 ntBASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
TRAPPC4Q9Y296 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms