Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AL390754.1-201ENST00000619088 582 ntBASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 AC025048.3-201ENST00000590609 569 ntBASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 AC005702.4-201ENST00000618393 416 ntBASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 PAUPAR-201ENST00000630360 2965 ntBASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA4Q9UN74 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 AL607033.1-201ENST00000623900 1599 ntBASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 TARDBPP1-201ENST00000442013 1203 ntBASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHA4Q9UN74 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms