Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 AC009407.1-201ENST00000568958 598 ntBASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 AC068418.2-201ENST00000577309 3703 ntBASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 AL365203.3-201ENST00000609742 2057 ntBASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXD3Q9UJU5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AL080243.2-201ENST00000418783 582 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AC093004.1-201ENST00000508850 424 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AC135586.1-201ENST00000539323 574 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AL132655.2-201ENST00000596276 594 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AC008738.7-201ENST00000609744 511 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AC112504.1-201ENST00000623415 1841 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AP001282.1-201ENST00000531301 1499 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AC007541.1-201ENST00000570282 1469 ntBASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FOXD3Q9UJU5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 AC008741.2-201ENST00000612792 3115 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 OR8S1-201ENST00000310194 1080 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 MEP1AP4-201ENST00000423244 1087 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 BANF1P1-201ENST00000553684 263 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 AL359881.2-201ENST00000602973 570 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.3□□□□□ -0.12
FOXD3Q9UJU5 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms