Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 AC105020.1-201ENST00000435356 2205 ntBASIC18.05■□□□□ 0.48
CPA4Q9UI42 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 MTX1P1-201ENST00000440904 838 ntBASIC18.05■□□□□ 0.48
CPA4Q9UI42 HOMER2P2-201ENST00000451621 847 ntBASIC18.05■□□□□ 0.48
CPA4Q9UI42 SCARNA20.5-201ENST00000516991 142 ntBASIC18.05■□□□□ 0.48
CPA4Q9UI42 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 AC138028.6-201ENST00000616106 1482 ntBASIC18.05■□□□□ 0.48
CPA4Q9UI42 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPA4Q9UI42 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPA4Q9UI42 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 PKD1P1-201ENST00000458669 6805 ntBASIC18.04■□□□□ 0.48
CPA4Q9UI42 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 AL590640.2-201ENST00000457038 527 ntBASIC18.04■□□□□ 0.48
CPA4Q9UI42 RPSAP36-202ENST00000494591 1261 ntBASIC18.04■□□□□ 0.48
CPA4Q9UI42 HIST2H2BC-201ENST00000498492 580 ntBASIC18.04■□□□□ 0.48
CPA4Q9UI42 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 AC105129.2-201ENST00000559536 390 ntBASIC18.04■□□□□ 0.48
CPA4Q9UI42 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CPA4Q9UI42 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPA4Q9UI42 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 AC004898.1-201ENST00000451057 766 ntBASIC18.03■□□□□ 0.48
CPA4Q9UI42 EIF4HP1-201ENST00000453115 687 ntBASIC18.03■□□□□ 0.48
CPA4Q9UI42 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.03■□□□□ 0.48
CPA4Q9UI42 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPA4Q9UI42 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
CPA4Q9UI42 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPA4Q9UI42 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.02■□□□□ 0.48
CPA4Q9UI42 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPA4Q9UI42 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPA4Q9UI42 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPA4Q9UI42 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPA4Q9UI42 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPA4Q9UI42 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms