Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 AC092068.3-201ENST00000587894 2016 ntBASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 MRPL22P1-201ENST00000505398 616 ntBASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
RIMBP3Q9UFD9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 RN7SL81P-201ENST00000493781 261 ntBASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 AP002490.2-201ENST00000524791 560 ntBASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 AC055811.3-201ENST00000584952 686 ntBASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 HMGB1P24-201ENST00000611897 328 ntBASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 CR392039.1-201ENST00000623217 204 ntBASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RIMBP3Q9UFD9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 Z69890.1-201ENST00000382990 339 ntBASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 ORAOV1P1-201ENST00000503108 395 ntBASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 AC008723.1-201ENST00000506922 207 ntBASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 MIR4683-201ENST00000579659 81 ntBASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RIMBP3Q9UFD9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 MIR557-201ENST00000385239 98 ntBASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AL583805.1-201ENST00000391389 531 ntBASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AQP7P5-201ENST00000428759 1049 ntBASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AQP7P4-201ENST00000447083 1042 ntBASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AQP7P2-201ENST00000453967 1041 ntBASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AQP7P3-201ENST00000624547 1041 ntBASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 AL645728.1-201ENST00000366221 2101 ntBASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
RIMBP3Q9UFD9 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 PGAM1P12-201ENST00000505622 748 ntBASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 AC100827.2-201ENST00000563214 1194 ntBASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 RPS5-204ENST00000598098 536 ntTSL 2 BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms