Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 TTTY23B-201ENST00000442790 549 ntBASIC19.14■□□□□ 0.65
SALL1Q9NSC2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AL359881.2-201ENST00000602973 570 ntBASIC19.14■□□□□ 0.65
SALL1Q9NSC2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AL033527.5-201ENST00000641382 801 ntBASIC19.14■□□□□ 0.65
SALL1Q9NSC2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 AC007389.4-201ENST00000454674 793 ntBASIC19.13■□□□□ 0.65
SALL1Q9NSC2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SALL1Q9NSC2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 ATP5G2P4-201ENST00000442175 420 ntBASIC19.12■□□□□ 0.65
SALL1Q9NSC2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 FAM86LP-201ENST00000478302 853 ntBASIC19.12■□□□□ 0.65
SALL1Q9NSC2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 AL607033.1-201ENST00000623900 1599 ntBASIC19.12■□□□□ 0.65
SALL1Q9NSC2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SALL1Q9NSC2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.11■□□□□ 0.65
SALL1Q9NSC2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms