Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 AC107890.1-201ENST00000422478 521 ntBASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 MTND6P24-201ENST00000440466 518 ntBASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 AC140878.1-201ENST00000565277 250 ntBASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 AL691432.1-201ENST00000596308 1422 ntBASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHAF3Q9NRP4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 PCDH8P1-201ENST00000428983 2773 ntBASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 CETN4P-206ENST00000642099 2168 ntBASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 AC069120.2-201ENST00000524091 540 ntBASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 AL513523.2-202ENST00000427283 2040 ntBASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SDHAF3Q9NRP4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms