Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 ELK2AP-201ENST00000392510 1007 ntBASIC16.88■□□□□ 0.29
TLR9Q9NR96 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 C1QBPP1-201ENST00000400117 770 ntBASIC16.88■□□□□ 0.29
TLR9Q9NR96 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 AL049840.4-201ENST00000602422 811 ntBASIC16.88■□□□□ 0.29
TLR9Q9NR96 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 BNIP3P1-202ENST00000550043 1585 ntBASIC16.87■□□□□ 0.29
TLR9Q9NR96 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 AC120045.2-201ENST00000567334 178 ntBASIC16.87■□□□□ 0.29
TLR9Q9NR96 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 AC244093.1-201ENST00000610837 814 ntBASIC16.87■□□□□ 0.29
TLR9Q9NR96 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR9Q9NR96 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR9Q9NR96 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC105020.1-201ENST00000435356 2205 ntBASIC16.86■□□□□ 0.29
TLR9Q9NR96 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 BAATP1-201ENST00000412284 1225 ntBASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 PFN1P12-201ENST00000455938 534 ntBASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC108725.1-201ENST00000495472 409 ntBASIC16.86■□□□□ 0.29
TLR9Q9NR96 SLED1-202ENST00000512051 380 ntBASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 AC103810.3-201ENST00000583567 96 ntBASIC16.86■□□□□ 0.29
TLR9Q9NR96 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR9Q9NR96 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.86■□□□□ 0.29
TLR9Q9NR96 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms