Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 AC007551.1-201ENST00000457394 519 ntBASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 ZNF767P-206ENST00000513792 565 ntBASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM7Q9NR12 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 GPAA1P2-201ENST00000417923 928 ntBASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 AL158212.4-201ENST00000624062 1286 ntBASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM7Q9NR12 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 ELK2AP-201ENST00000392510 1007 ntBASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 AZGP1P1-201ENST00000411909 902 ntBASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 AP000812.2-201ENST00000538934 718 ntBASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 LINC01115-203ENST00000606068 577 ntBASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM7Q9NR12 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms