Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 AC021087.4-201ENST00000563761 564 ntBASIC19.73■□□□□ 0.75
UPF2Q9HAU5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 AL358472.4-201ENST00000633140 710 ntBASIC19.73■□□□□ 0.75
UPF2Q9HAU5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF2Q9HAU5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.72■□□□□ 0.75
UPF2Q9HAU5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 DUSP5P1-201ENST00000441325 1139 ntBASIC19.72■□□□□ 0.75
UPF2Q9HAU5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 MIR1199-201ENST00000621445 119 ntBASIC19.72■□□□□ 0.75
UPF2Q9HAU5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
UPF2Q9HAU5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 AL009178.2-201ENST00000597278 2719 ntBASIC19.71■□□□□ 0.75
UPF2Q9HAU5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 MRPL20P1-201ENST00000400819 433 ntBASIC19.71■□□□□ 0.75
UPF2Q9HAU5 KRT18P27-201ENST00000427733 1299 ntBASIC19.71■□□□□ 0.75
UPF2Q9HAU5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms