Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.2■□□□□ 0.34
NXF3Q9H4D5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 U91328.1-201ENST00000437528 223 ntBASIC17.19■□□□□ 0.34
NXF3Q9H4D5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 RN7SL399P-201ENST00000471648 279 ntBASIC17.19■□□□□ 0.34
NXF3Q9H4D5 GIMAP3P-201ENST00000495150 836 ntBASIC17.19■□□□□ 0.34
NXF3Q9H4D5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 AC036164.1-201ENST00000570544 333 ntBASIC17.19■□□□□ 0.34
NXF3Q9H4D5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 AC084018.2-201ENST00000613093 2607 ntBASIC17.19■□□□□ 0.34
NXF3Q9H4D5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 AC018695.7-201ENST00000624587 2492 ntBASIC17.19■□□□□ 0.34
NXF3Q9H4D5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NXF3Q9H4D5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 RN7SL837P-201ENST00000463010 287 ntBASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 TMEM261P1-201ENST00000604899 340 ntBASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NXF3Q9H4D5 AC011477.6-201ENST00000604980 1927 ntBASIC17.17■□□□□ 0.34
NXF3Q9H4D5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms