Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AP001282.1-201ENST00000531301 1499 ntBASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 YBX2P1-201ENST00000394192 760 ntBASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 AC008267.7-201ENST00000624570 1194 ntBASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 AC009090.5-201ENST00000624886 2285 ntBASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UPF3BQ9BZI7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 AC020658.6-201ENST00000623564 1870 ntBASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 AC022532.1-201ENST00000624563 1728 ntBASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 SPCS2P4-201ENST00000436160 681 ntBASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 AC134684.3-201ENST00000641758 218 ntBASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF3BQ9BZI7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 AC023824.1-201ENST00000562945 2975 ntBASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 MCCD1P2-201ENST00000423228 335 ntBASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF3BQ9BZI7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms