Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ECEL1P3-201ENST00000427961 737 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AL390955.1-201ENST00000428694 934 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 SIGLEC30P-201ENST00000455569 941 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 GUSBP12-201ENST00000513727 720 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AL031432.5-201ENST00000641059 760 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 LINC00528-201ENST00000600723 2160 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AC092919.2-201ENST00000623631 1645 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 HNRNPRP1-201ENST00000453465 1695 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 GPAA1P2-202ENST00000606848 1787 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 AC132938.5-201ENST00000624980 1813 ntBASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms