Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AL365330.1-201ENST00000607459 531 ntBASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 C20orf181-201ENST00000623918 480 ntBASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 AKAP8P1-201ENST00000434743 1349 ntBASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.14■□□□□ 0.01
YIPF4Q9BSR8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 SPDYE11-202ENST00000450699 704 ntBASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 AC243562.1-201ENST00000560672 389 ntBASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 SPDYE9P-201ENST00000570642 692 ntBASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 SPDYE10P-202ENST00000612005 668 ntBASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 SPDYE8P-202ENST00000612377 668 ntBASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 SPTSSB-204ENST00000617024 1292 ntBASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.13■□□□□ 0.01
YIPF4Q9BSR8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 FOXO1B-201ENST00000504678 1527 ntBASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 AC008677.1-201ENST00000519230 1561 ntBASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 AC254562.1-201ENST00000417586 456 ntBASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 HTR5BP-201ENST00000430851 1154 ntBASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.12■□□□□ 0.01
YIPF4Q9BSR8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms