Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN18Q99952 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN18Q99952 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN18Q99952 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN18Q99952 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN18Q99952 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 AL138799.1-201ENST00000448213 1675 ntBASIC18.06■□□□□ 0.48
PTPN18Q99952 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN18Q99952 CNN2P10-201ENST00000443067 918 ntBASIC18.06■□□□□ 0.48
PTPN18Q99952 LDHBP1-201ENST00000455730 1119 ntBASIC18.06■□□□□ 0.48
PTPN18Q99952 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN18Q99952 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.06■□□□□ 0.48
PTPN18Q99952 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PTPN18Q99952 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PTPN18Q99952 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PTPN18Q99952 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN18Q99952 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 AC018892.3-201ENST00000623986 2499 ntBASIC18.06■□□□□ 0.48
PTPN18Q99952 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN18Q99952 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN18Q99952 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN18Q99952 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPN18Q99952 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN18Q99952 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN18Q99952 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN18Q99952 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPN18Q99952 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPN18Q99952 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 AC104457.1-201ENST00000401024 814 ntBASIC18.05■□□□□ 0.48
PTPN18Q99952 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PTPN18Q99952 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN18Q99952 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN18Q99952 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN18Q99952 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN18Q99952 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN18Q99952 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN18Q99952 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN18Q99952 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN18Q99952 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
PTPN18Q99952 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN18Q99952 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN18Q99952 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN18Q99952 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN18Q99952 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN18Q99952 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms