Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SMOQ99835 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SMOQ99835 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.7■□□□□ 0.26
SMOQ99835 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.7■□□□□ 0.26
SMOQ99835 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.7■□□□□ 0.26
SMOQ99835 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 API5-211ENST00000534695 560 ntTSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 TIMM17BP1-201ENST00000545713 516 ntBASIC16.7■□□□□ 0.26
SMOQ99835 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SMOQ99835 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SMOQ99835 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 COX20P2-201ENST00000452636 358 ntBASIC16.69■□□□□ 0.26
SMOQ99835 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 MEIS3P1-201ENST00000495167 958 ntBASIC16.69■□□□□ 0.26
SMOQ99835 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 TPRX2P-201ENST00000535362 881 ntBASIC16.69■□□□□ 0.26
SMOQ99835 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 SPDYE22P-201ENST00000582158 798 ntBASIC16.69■□□□□ 0.26
SMOQ99835 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.69■□□□□ 0.26
SMOQ99835 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
SMOQ99835 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SMOQ99835 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMOQ99835 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.69■□□□□ 0.26
SMOQ99835 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SMOQ99835 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SMOQ99835 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
SMOQ99835 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.68■□□□□ 0.26
SMOQ99835 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMOQ99835 AP003680.1-201ENST00000598970 3660 ntBASIC16.68■□□□□ 0.26
SMOQ99835 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.68■□□□□ 0.26
SMOQ99835 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.68■□□□□ 0.26
SMOQ99835 DFFBP1-201ENST00000433250 979 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms