Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC068587.6-202ENST00000641839 5619 ntBASIC16.03■□□□□ 0.16
CPNE1Q99829 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CPNE1Q99829 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.03■□□□□ 0.16
CPNE1Q99829 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CPNE1Q99829 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE1Q99829 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPNE1Q99829 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CPNE1Q99829 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE1Q99829 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
CPNE1Q99829 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE1Q99829 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE1Q99829 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE1Q99829 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE1Q99829 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE1Q99829 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE1Q99829 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE1Q99829 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE1Q99829 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE1Q99829 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE1Q99829 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE1Q99829 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE1Q99829 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE1Q99829 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.02■□□□□ 0.16
CPNE1Q99829 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE1Q99829 AL513190.1-201ENST00000621254 727 ntBASIC16.02■□□□□ 0.16
CPNE1Q99829 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 AC067930.6-201ENST00000623257 4947 ntBASIC16.02■□□□□ 0.16
CPNE1Q99829 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE1Q99829 FOXO1B-201ENST00000504678 1527 ntBASIC16.02■□□□□ 0.15
CPNE1Q99829 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CPNE1Q99829 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CPNE1Q99829 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.02■□□□□ 0.15
CPNE1Q99829 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 TNRC18P2-201ENST00000417666 2714 ntBASIC16.02■□□□□ 0.15
CPNE1Q99829 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CPNE1Q99829 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CPNE1Q99829 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE1Q99829 AL513477.1-201ENST00000602865 2407 ntBASIC16.02■□□□□ 0.15
CPNE1Q99829 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CPNE1Q99829 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE1Q99829 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE1Q99829 BNIP3P1-202ENST00000550043 1585 ntBASIC16.01■□□□□ 0.15
CPNE1Q99829 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE1Q99829 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE1Q99829 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE1Q99829 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
CPNE1Q99829 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE1Q99829 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE1Q99829 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE1Q99829 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE1Q99829 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE1Q99829 MST1L-201ENST00000442552 2185 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms