Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDNQ99608 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.13■□□□□ 0.17
NDNQ99608 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.13■□□□□ 0.17
NDNQ99608 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NDNQ99608 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
NDNQ99608 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NDNQ99608 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 HAUS4P1-201ENST00000406739 1145 ntBASIC16.13■□□□□ 0.17
NDNQ99608 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.13■□□□□ 0.17
NDNQ99608 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NDNQ99608 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.13■□□□□ 0.17
NDNQ99608 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 AC091812.2-201ENST00000619081 385 ntBASIC16.13■□□□□ 0.17
NDNQ99608 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.13■□□□□ 0.17
NDNQ99608 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.13■□□□□ 0.17
NDNQ99608 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.13■□□□□ 0.17
NDNQ99608 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.13■□□□□ 0.17
NDNQ99608 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.13■□□□□ 0.17
NDNQ99608 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDNQ99608 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NDNQ99608 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
NDNQ99608 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.12■□□□□ 0.17
NDNQ99608 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NDNQ99608 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
NDNQ99608 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.12■□□□□ 0.17
NDNQ99608 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.12■□□□□ 0.17
NDNQ99608 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.12■□□□□ 0.17
NDNQ99608 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.12■□□□□ 0.17
NDNQ99608 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NDNQ99608 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDNQ99608 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NDNQ99608 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.11■□□□□ 0.17
NDNQ99608 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NDNQ99608 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.11■□□□□ 0.17
NDNQ99608 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.11■□□□□ 0.17
NDNQ99608 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.11■□□□□ 0.17
NDNQ99608 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.11■□□□□ 0.17
NDNQ99608 RARRES2P8-201ENST00000566335 367 ntBASIC16.11■□□□□ 0.17
NDNQ99608 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.11■□□□□ 0.17
NDNQ99608 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
NDNQ99608 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.11■□□□□ 0.17
NDNQ99608 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDNQ99608 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.11■□□□□ 0.17
NDNQ99608 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms