Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 AL592309.1-201ENST00000443127 649 ntBASIC15.24■□□□□ 0.03
BBS4Q96RK4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 AP000842.3-202ENST00000569238 1080 ntBASIC15.24■□□□□ 0.03
BBS4Q96RK4 MIR3687-2-201ENST00000577708 61 ntBASIC15.24■□□□□ 0.03
BBS4Q96RK4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 MIR3687-1-201ENST00000614492 61 ntBASIC15.24■□□□□ 0.03
BBS4Q96RK4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BBS4Q96RK4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BBS4Q96RK4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 ELL2P1-201ENST00000413990 1906 ntBASIC15.23■□□□□ 0.03
BBS4Q96RK4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 AP001282.1-201ENST00000531301 1499 ntBASIC15.23■□□□□ 0.03
BBS4Q96RK4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 AC142381.1-201ENST00000426099 345 ntBASIC15.23■□□□□ 0.03
BBS4Q96RK4 GPX1P2-201ENST00000429271 606 ntBASIC15.23■□□□□ 0.03
BBS4Q96RK4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 AL162727.3-201ENST00000635661 2787 ntBASIC15.23■□□□□ 0.03
BBS4Q96RK4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
BBS4Q96RK4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BBS4Q96RK4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 FOXO1B-201ENST00000504678 1527 ntBASIC15.22■□□□□ 0.03
BBS4Q96RK4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms