Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RBM17P3-201ENST00000417687 1192 ntBASIC13.82□□□□□ -0.2
CMTM3Q96MX0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 AP001269.4-201ENST00000609611 512 ntBASIC13.82□□□□□ -0.2
CMTM3Q96MX0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 AC126755.1-201ENST00000525846 6405 ntBASIC13.82□□□□□ -0.2
CMTM3Q96MX0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 CICP14-201ENST00000629111 2732 ntBASIC13.81□□□□□ -0.2
CMTM3Q96MX0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 TMPOP1-202ENST00000424642 1267 ntBASIC13.81□□□□□ -0.2
CMTM3Q96MX0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 AC104819.1-201ENST00000504587 486 ntBASIC13.81□□□□□ -0.2
CMTM3Q96MX0 AP002469.2-201ENST00000531724 424 ntBASIC13.81□□□□□ -0.2
CMTM3Q96MX0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMTM3Q96MX0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 OR2I1P-210ENST00000642037 4691 ntBASIC13.8□□□□□ -0.2
CMTM3Q96MX0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMTM3Q96MX0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms