Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 FAM220BP-201ENST00000377689 816 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 HLA-H-201ENST00000383620 1096 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 HTR5BP-201ENST00000430851 1154 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 ADH5P3-201ENST00000433842 1137 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 DNAJB3-201ENST00000446806 729 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC079140.1-201ENST00000508039 487 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 PGAM5P1-201ENST00000518923 814 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC243562.1-201ENST00000560672 389 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC061975.2-201ENST00000581722 295 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.07□□□□□ -0.16
SPTSSAQ969W0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SPTSSAQ969W0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 AP003680.1-201ENST00000598970 3660 ntBASIC14.06□□□□□ -0.16
SPTSSAQ969W0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 AC142381.1-201ENST00000426099 345 ntBASIC14.06□□□□□ -0.16
SPTSSAQ969W0 SPCS2P4-201ENST00000436160 681 ntBASIC14.06□□□□□ -0.16
SPTSSAQ969W0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 AP000842.3-202ENST00000569238 1080 ntBASIC14.06□□□□□ -0.16
SPTSSAQ969W0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SPTSSAQ969W0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 UXT-AS1-201ENST00000590504 1525 ntBASIC14.05□□□□□ -0.16
SPTSSAQ969W0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSAQ969W0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms