Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 RNA5SP415-201ENST00000517246 115 ntBASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 MIR4313-201ENST00000580760 101 ntBASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 KRT8P44-201ENST00000441609 1350 ntBASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 AL691432.1-201ENST00000596308 1422 ntBASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC44A1Q8WWI5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 BNIP3P1-202ENST00000550043 1585 ntBASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 FAAHP1-202ENST00000446499 1238 ntBASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 IGHV3-22-201ENST00000520721 359 ntBASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AC243562.2-201ENST00000561247 970 ntBASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms