Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AC005225.4-201ENST00000557330 545 ntBASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AC239800.4-201ENST00000603712 296 ntBASIC17.18■□□□□ 0.34
BEST2Q8NFU1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
BEST2Q8NFU1 Z97205.2-201ENST00000564697 1639 ntBASIC17.18■□□□□ 0.34
BEST2Q8NFU1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 AC124067.4-201ENST00000519691 2379 ntBASIC17.17■□□□□ 0.34
BEST2Q8NFU1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 DOC2GP-202ENST00000514950 1163 ntBASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 TIMM17BP1-201ENST00000545713 516 ntBASIC17.17■□□□□ 0.34
BEST2Q8NFU1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 AC012645.4-201ENST00000610691 1061 ntBASIC17.17■□□□□ 0.34
BEST2Q8NFU1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST2Q8NFU1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 PCDHB19P-201ENST00000570871 2371 ntBASIC17.16■□□□□ 0.34
BEST2Q8NFU1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 AC069224.1-201ENST00000566372 1715 ntBASIC17.16■□□□□ 0.34
BEST2Q8NFU1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 SPDYE18-201ENST00000510091 1050 ntBASIC17.16■□□□□ 0.34
BEST2Q8NFU1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 SRD5A3P1-201ENST00000603021 949 ntBASIC17.16■□□□□ 0.34
BEST2Q8NFU1 AL662799.1-202ENST00000614205 422 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms