Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGI2Q8N0V4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.5■□□□□ 0.23
LGI2Q8N0V4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LGI2Q8N0V4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LGI2Q8N0V4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGI2Q8N0V4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.5■□□□□ 0.23
LGI2Q8N0V4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 AC002472.2-201ENST00000442739 958 ntBASIC16.49■□□□□ 0.23
LGI2Q8N0V4 EEF1DP4-201ENST00000446006 880 ntBASIC16.49■□□□□ 0.23
LGI2Q8N0V4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 MIR3197-201ENST00000582241 73 ntBASIC16.49■□□□□ 0.23
LGI2Q8N0V4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGI2Q8N0V4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 SERBP1P5-201ENST00000510079 1181 ntBASIC16.48■□□□□ 0.23
LGI2Q8N0V4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 AC135586.1-201ENST00000539323 574 ntBASIC16.48■□□□□ 0.23
LGI2Q8N0V4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 LINC02560-201ENST00000596379 459 ntBASIC16.48■□□□□ 0.23
LGI2Q8N0V4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 AC004840.1-201ENST00000636359 365 ntBASIC16.48■□□□□ 0.23
LGI2Q8N0V4 AL109936.8-201ENST00000641772 604 ntBASIC16.48■□□□□ 0.23
LGI2Q8N0V4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGI2Q8N0V4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGI2Q8N0V4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LGI2Q8N0V4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGI2Q8N0V4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
LGI2Q8N0V4 AL596257.1-201ENST00000641463 2694 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms