Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 AC026396.1-201ENST00000419388 421 ntBASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM42Q8IWZ5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 AC012569.1-201ENST00000591191 1524 ntBASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM42Q8IWZ5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AC007292.2-201ENST00000593524 1812 ntBASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 AL365330.1-201ENST00000607459 531 ntBASIC16.05■□□□□ 0.16
TRIM42Q8IWZ5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms