Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 TMEM14DP-201ENST00000422205 345 ntBASIC17.8■□□□□ 0.44
TRIM50Q86XT4 RPL13P2-201ENST00000440687 659 ntBASIC17.8■□□□□ 0.44
TRIM50Q86XT4 TARDBPP1-201ENST00000442013 1203 ntBASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 WFDC1-204ENST00000613603 549 ntBASIC17.8■□□□□ 0.44
TRIM50Q86XT4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 PCDH8P1-201ENST00000428983 2773 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 PCDHA14-201ENST00000506751 2298 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 ARSEP1-201ENST00000420443 635 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 KRT18P64-201ENST00000434946 1219 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AC007274.1-201ENST00000439805 662 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AL391069.4-201ENST00000609583 481 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AL158212.4-201ENST00000624062 1286 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AC006449.6-201ENST00000612330 2296 ntBASIC17.79■□□□□ 0.44
TRIM50Q86XT4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM50Q86XT4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM50Q86XT4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms