Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 C1QBPP1-201ENST00000400117 770 ntBASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC9.68□□□□□ -0.86
VPS13BQ7Z7G8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 HSPB1P2-201ENST00000448722 546 ntBASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AC145423.3-201ENST00000615987 467 ntBASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AP001282.1-201ENST00000531301 1499 ntBASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 RN7SL574P-201ENST00000581512 297 ntBASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AC009090.5-201ENST00000624886 2285 ntBASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 EEF1DP1-201ENST00000585891 896 ntBASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 AC026471.1-201ENST00000564629 3026 ntBASIC9.67□□□□□ -0.86
VPS13BQ7Z7G8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC9.66□□□□□ -0.86
VPS13BQ7Z7G8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13BQ7Z7G8 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13BQ7Z7G8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13BQ7Z7G8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
VPS13BQ7Z7G8 C2orf27AP3-201ENST00000434123 579 ntBASIC9.66□□□□□ -0.86
VPS13BQ7Z7G8 LY6E-208ENST00000520531 490 ntTSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms