Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 AL132994.2-201ENST00000603120 687 ntBASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RGPD4Q7Z3J3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 AC021723.1-201ENST00000486306 515 ntBASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 RN7SL67P-201ENST00000492147 296 ntBASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RGPD4Q7Z3J3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 AC004923.1-202ENST00000642106 209 ntBASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RGPD4Q7Z3J3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 TUBB8P8-201ENST00000458717 1058 ntBASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 AC010234.1-201ENST00000494599 870 ntBASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 AC074138.1-201ENST00000611182 1303 ntBASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 RN7SKP175-201ENST00000408472 289 ntBASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.67■□□□□ 0.74
RGPD4Q7Z3J3 TMCO5B-205ENST00000530020 894 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms