Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 HAUS4P1-201ENST00000406739 1145 ntBASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 SLC25A39P2-201ENST00000537614 270 ntBASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 AC010327.4-202ENST00000591484 748 ntBASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 AC099063.4-201ENST00000641099 1602 ntBASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NHLRC1Q6VVB1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 AP3S2-216ENST00000617003 1561 ntBASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 GPS2P2-201ENST00000430745 888 ntBASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.43□□□□□ -0.1
NHLRC1Q6VVB1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NHLRC1Q6VVB1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms