Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF20Q5VTR2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF20Q5VTR2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF20Q5VTR2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
RNF20Q5VTR2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 PKD1P5-201ENST00000532415 10291 ntBASIC19.14■□□□□ 0.65
RNF20Q5VTR2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 AC211486.1-202ENST00000416371 468 ntBASIC19.14■□□□□ 0.65
RNF20Q5VTR2 AL353705.2-201ENST00000428243 662 ntBASIC19.14■□□□□ 0.65
RNF20Q5VTR2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 AC211476.1-201ENST00000503899 468 ntBASIC19.14■□□□□ 0.65
RNF20Q5VTR2 ALG1L8P-201ENST00000533887 760 ntBASIC19.14■□□□□ 0.65
RNF20Q5VTR2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 AL136982.4-201ENST00000437689 1740 ntBASIC19.14■□□□□ 0.65
RNF20Q5VTR2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
RNF20Q5VTR2 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.13■□□□□ 0.65
RNF20Q5VTR2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 AC092865.5-201ENST00000545435 363 ntBASIC19.13■□□□□ 0.65
RNF20Q5VTR2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 CYP4F24P-201ENST00000586049 1580 ntBASIC19.13■□□□□ 0.65
RNF20Q5VTR2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF20Q5VTR2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 REXO1L1P-202ENST00000608646 1974 ntBASIC19.12■□□□□ 0.65
RNF20Q5VTR2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 FAM58DP-201ENST00000428076 619 ntBASIC19.12■□□□□ 0.65
RNF20Q5VTR2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 AC093520.2-201ENST00000561830 333 ntBASIC19.12■□□□□ 0.65
RNF20Q5VTR2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 AC068587.6-202ENST00000641839 5619 ntBASIC19.12■□□□□ 0.65
RNF20Q5VTR2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.12■□□□□ 0.65
RNF20Q5VTR2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF20Q5VTR2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF20Q5VTR2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms