Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 AC103702.1-201ENST00000548801 2630 ntBASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC39BQ5VTQ0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 MIR943-201ENST00000401286 94 ntBASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 AC105021.1-202ENST00000570572 669 ntBASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC39BQ5VTQ0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.71■□□□□ 0.26
TTC39BQ5VTQ0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TTC39BQ5VTQ0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.71■□□□□ 0.26
TTC39BQ5VTQ0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
TTC39BQ5VTQ0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 TSPY26P-202ENST00000565928 3884 ntBASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC39BQ5VTQ0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 AC104640.1-201ENST00000562617 2109 ntBASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 MIR770-201ENST00000390219 98 ntBASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms