Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 AC008677.1-201ENST00000519230 1561 ntBASIC15.64■□□□□ 0.09
SGO1Q5FBB7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 AC002347.1-201ENST00000569543 541 ntBASIC15.64■□□□□ 0.09
SGO1Q5FBB7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 AC099522.2-201ENST00000607001 744 ntBASIC15.63■□□□□ 0.09
SGO1Q5FBB7 AL365330.1-201ENST00000607459 531 ntBASIC15.63■□□□□ 0.09
SGO1Q5FBB7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SGO1Q5FBB7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 FAM197Y3-203ENST00000618346 717 ntBASIC15.62■□□□□ 0.09
SGO1Q5FBB7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGO1Q5FBB7 AC073347.1-201ENST00000421633 2643 ntBASIC15.62■□□□□ 0.09
SGO1Q5FBB7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGO1Q5FBB7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGO1Q5FBB7 AL596257.1-201ENST00000641463 2694 ntBASIC15.61■□□□□ 0.09
SGO1Q5FBB7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SGO1Q5FBB7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.61■□□□□ 0.09
SGO1Q5FBB7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SGO1Q5FBB7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms