Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 MIR346-201ENST00000362234 95 ntBASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AL139400.1-201ENST00000366220 510 ntBASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AC142381.1-201ENST00000426099 345 ntBASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AC005237.2-201ENST00000434368 219 ntBASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AC093724.1-201ENST00000448659 1027 ntBASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 SLC25A39P2-201ENST00000537614 270 ntBASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AC073389.1-201ENST00000595595 795 ntBASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KHDC1Q4VXA5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.27■□□□□ 0.19
KHDC1Q4VXA5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.27■□□□□ 0.19
KHDC1Q4VXA5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KHDC1Q4VXA5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
KHDC1Q4VXA5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.27■□□□□ 0.19
KHDC1Q4VXA5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KHDC1Q4VXA5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.27■□□□□ 0.19
KHDC1Q4VXA5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 UXT-AS1-201ENST00000590504 1525 ntBASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 GPS2P2-201ENST00000430745 888 ntBASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 AC092183.1-201ENST00000469884 875 ntBASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 AC084121.4-201ENST00000641598 221 ntBASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 AC079781.4-201ENST00000641908 219 ntBASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 AF228730.8-201ENST00000642140 221 ntBASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
KHDC1Q4VXA5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
KHDC1Q4VXA5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms