Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 MIR3909-201ENST00000579518 119 ntBASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 MIR4469-201ENST00000583919 79 ntBASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCGF3Q3KNV8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF3Q3KNV8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 HMGA1P7-201ENST00000406908 502 ntBASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 PMS2P4-201ENST00000412466 1052 ntBASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 AP006288.1-201ENST00000446065 395 ntBASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 ALG1L5P-201ENST00000482043 771 ntBASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 AC134684.3-201ENST00000641758 218 ntBASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF3Q3KNV8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 AC006277.1-201ENST00000624348 1610 ntBASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 AC109635.5-201ENST00000533593 962 ntBASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF3Q3KNV8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms