Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CDK3Q00526 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDK3Q00526 CDC14C-201ENST00000428251 1719 ntBASIC15.69■□□□□ 0.1
CDK3Q00526 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDK3Q00526 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 AC087499.6-201ENST00000411576 835 ntBASIC15.69■□□□□ 0.1
CDK3Q00526 MEP1AP4-201ENST00000423244 1087 ntBASIC15.69■□□□□ 0.1
CDK3Q00526 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK3Q00526 MEIS3P1-201ENST00000495167 958 ntBASIC15.69■□□□□ 0.1
CDK3Q00526 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK3Q00526 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.69■□□□□ 0.1
CDK3Q00526 AC055876.2-201ENST00000531834 546 ntBASIC15.69■□□□□ 0.1
CDK3Q00526 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.69■□□□□ 0.1
CDK3Q00526 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
CDK3Q00526 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CDK3Q00526 SLC7A15P-201ENST00000424028 1363 ntBASIC15.69■□□□□ 0.1
CDK3Q00526 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDK3Q00526 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDK3Q00526 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK3Q00526 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK3Q00526 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 LINC02447-202ENST00000501888 2146 ntBASIC15.68■□□□□ 0.1
CDK3Q00526 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK3Q00526 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.68■□□□□ 0.1
CDK3Q00526 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 AC140912.1-201ENST00000577171 1054 ntBASIC15.68■□□□□ 0.1
CDK3Q00526 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 AC097359.3-201ENST00000603982 1210 ntBASIC15.68■□□□□ 0.1
CDK3Q00526 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK3Q00526 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 AC025048.6-201ENST00000634326 1161 ntBASIC15.68■□□□□ 0.1
CDK3Q00526 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK3Q00526 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 AC124067.4-201ENST00000519691 2379 ntBASIC15.68■□□□□ 0.1
CDK3Q00526 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK3Q00526 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CDK3Q00526 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK3Q00526 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK3Q00526 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.67■□□□□ 0.1
CDK3Q00526 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK3Q00526 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms