Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX6-1P78426 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.2□□□□□ -0.14
NKX6-1P78426 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.2□□□□□ -0.14
NKX6-1P78426 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 COX5BP8-201ENST00000416911 349 ntBASIC14.2□□□□□ -0.14
NKX6-1P78426 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX6-1P78426 ATP5G2P4-201ENST00000442175 420 ntBASIC14.2□□□□□ -0.14
NKX6-1P78426 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX6-1P78426 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX6-1P78426 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX6-1P78426 PRYP6-201ENST00000514804 343 ntBASIC14.2□□□□□ -0.14
NKX6-1P78426 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX6-1P78426 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX6-1P78426 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX6-1P78426 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NKX6-1P78426 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.2□□□□□ -0.14
NKX6-1P78426 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX6-1P78426 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-1P78426 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-1P78426 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NKX6-1P78426 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
NKX6-1P78426 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-1P78426 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-1P78426 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-1P78426 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 AC100757.3-201ENST00000622361 1406 ntBASIC14.19□□□□□ -0.14
NKX6-1P78426 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 PCDHA14-201ENST00000506751 2298 ntBASIC14.19□□□□□ -0.14
NKX6-1P78426 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-1P78426 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
NKX6-1P78426 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-1P78426 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX6-1P78426 MRPS18AP1-201ENST00000414458 589 ntBASIC14.19□□□□□ -0.14
NKX6-1P78426 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX6-1P78426 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX6-1P78426 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX6-1P78426 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX6-1P78426 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.19□□□□□ -0.14
NKX6-1P78426 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-1P78426 AL590560.3-201ENST00000623350 461 ntBASIC14.19□□□□□ -0.14
NKX6-1P78426 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.19□□□□□ -0.14
NKX6-1P78426 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-1P78426 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 AC106886.4-201ENST00000623557 2502 ntBASIC14.19□□□□□ -0.14
NKX6-1P78426 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX6-1P78426 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX6-1P78426 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-1P78426 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-1P78426 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms