Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEP78395 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEP78395 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PRAMEP78395 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEP78395 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.22■□□□□ 0.19
PRAMEP78395 DNAJB3-201ENST00000446806 729 ntBASIC16.22■□□□□ 0.19
PRAMEP78395 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.22■□□□□ 0.19
PRAMEP78395 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.22■□□□□ 0.19
PRAMEP78395 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.22■□□□□ 0.19
PRAMEP78395 ALG1L5P-201ENST00000482043 771 ntBASIC16.22■□□□□ 0.19
PRAMEP78395 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.22■□□□□ 0.19
PRAMEP78395 AC243562.1-201ENST00000560672 389 ntBASIC16.22■□□□□ 0.19
PRAMEP78395 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.22■□□□□ 0.19
PRAMEP78395 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.22■□□□□ 0.19
PRAMEP78395 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
PRAMEP78395 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEP78395 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEP78395 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEP78395 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEP78395 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEP78395 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEP78395 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEP78395 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PRAMEP78395 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PRAMEP78395 AC008677.1-201ENST00000519230 1561 ntBASIC16.21■□□□□ 0.19
PRAMEP78395 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PRAMEP78395 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PRAMEP78395 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
PRAMEP78395 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PRAMEP78395 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEP78395 AP000347.1-202ENST00000435868 847 ntBASIC16.21■□□□□ 0.19
PRAMEP78395 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PRAMEP78395 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEP78395 AC079140.1-201ENST00000508039 487 ntBASIC16.21■□□□□ 0.19
PRAMEP78395 KRT8P48-201ENST00000515599 1220 ntBASIC16.21■□□□□ 0.19
PRAMEP78395 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEP78395 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.21■□□□□ 0.19
PRAMEP78395 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEP78395 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEP78395 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PRAMEP78395 AP005117.1-202ENST00000581724 1908 ntBASIC16.21■□□□□ 0.19
PRAMEP78395 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEP78395 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEP78395 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.21■□□□□ 0.18
PRAMEP78395 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.21■□□□□ 0.18
PRAMEP78395 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PRAMEP78395 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.21■□□□□ 0.18
PRAMEP78395 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEP78395 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEP78395 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEP78395 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEP78395 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.2■□□□□ 0.18
PRAMEP78395 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 SPCS2P4-201ENST00000436160 681 ntBASIC16.2■□□□□ 0.18
PRAMEP78395 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEP78395 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEP78395 RNA5SP410-201ENST00000516285 106 ntBASIC16.2■□□□□ 0.18
PRAMEP78395 AC005829.1-201ENST00000570002 483 ntBASIC16.2■□□□□ 0.18
PRAMEP78395 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms