Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ACTA1P68133 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ACTA1P68133 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ACTA1P68133 AP002414.2-201ENST00000591780 3365 ntBASIC14.33□□□□□ -0.12
ACTA1P68133 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.32□□□□□ -0.12
ACTA1P68133 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ACTA1P68133 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.32□□□□□ -0.12
ACTA1P68133 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.32□□□□□ -0.12
ACTA1P68133 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.32□□□□□ -0.12
ACTA1P68133 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 RPS2P28-201ENST00000314255 741 ntBASIC14.32□□□□□ -0.12
ACTA1P68133 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
ACTA1P68133 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.32□□□□□ -0.12
ACTA1P68133 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.32□□□□□ -0.12
ACTA1P68133 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.32□□□□□ -0.12
ACTA1P68133 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.32□□□□□ -0.12
ACTA1P68133 AL078644.1-201ENST00000609881 752 ntBASIC14.32□□□□□ -0.12
ACTA1P68133 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 AL365209.1-201ENST00000624418 6473 ntBASIC14.32□□□□□ -0.12
ACTA1P68133 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ACTA1P68133 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.32□□□□□ -0.12
ACTA1P68133 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.32□□□□□ -0.12
ACTA1P68133 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ACTA1P68133 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ACTA1P68133 WASH6P-202ENST00000359512 1437 ntBASIC14.32□□□□□ -0.12
ACTA1P68133 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ACTA1P68133 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 LINC01101-201ENST00000622953 1884 ntBASIC14.31□□□□□ -0.12
ACTA1P68133 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 AL589702.1-201ENST00000641229 1509 ntBASIC14.31□□□□□ -0.12
ACTA1P68133 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ACTA1P68133 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.31□□□□□ -0.12
ACTA1P68133 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTA1P68133 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTA1P68133 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTA1P68133 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.31□□□□□ -0.12
ACTA1P68133 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.31□□□□□ -0.12
ACTA1P68133 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 RNPS1P1-201ENST00000507437 918 ntBASIC14.31□□□□□ -0.12
ACTA1P68133 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.31□□□□□ -0.12
ACTA1P68133 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.31□□□□□ -0.12
ACTA1P68133 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.31□□□□□ -0.12
ACTA1P68133 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
ACTA1P68133 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.31□□□□□ -0.12
ACTA1P68133 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ACTA1P68133 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.31□□□□□ -0.12
ACTA1P68133 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ACTA1P68133 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms