Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CKS1BP61024 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS1BP61024 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS1BP61024 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.33□□□□□ -0.6
CKS1BP61024 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS1BP61024 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 AC093827.2-201ENST00000512654 315 ntBASIC11.33□□□□□ -0.6
CKS1BP61024 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.33□□□□□ -0.6
CKS1BP61024 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CKS1BP61024 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
CKS1BP61024 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.33□□□□□ -0.6
CKS1BP61024 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 AC013268.4-201ENST00000637413 2228 ntBASIC11.32□□□□□ -0.6
CKS1BP61024 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 AP000845.1-201ENST00000581677 2131 ntBASIC11.32□□□□□ -0.6
CKS1BP61024 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.32□□□□□ -0.6
CKS1BP61024 AC005521.1-201ENST00000393351 872 ntBASIC11.32□□□□□ -0.6
CKS1BP61024 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.32□□□□□ -0.6
CKS1BP61024 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 SIGLEC30P-201ENST00000455569 941 ntBASIC11.32□□□□□ -0.6
CKS1BP61024 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.32□□□□□ -0.6
CKS1BP61024 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.32□□□□□ -0.6
CKS1BP61024 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 AC073592.5-201ENST00000624854 528 ntBASIC11.32□□□□□ -0.6
CKS1BP61024 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 DMBT1P1-203ENST00000636837 4628 ntBASIC11.32□□□□□ -0.6
CKS1BP61024 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS1BP61024 AL645728.1-201ENST00000366221 2101 ntBASIC11.32□□□□□ -0.6
CKS1BP61024 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS1BP61024 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms