Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 AC067863.1-201ENST00000494933 530 ntBASIC16.92■□□□□ 0.3
SNX16P57768 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.92■□□□□ 0.3
SNX16P57768 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX16P57768 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX16P57768 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.92■□□□□ 0.3
SNX16P57768 MIR4453-201ENST00000584019 89 ntBASIC16.92■□□□□ 0.3
SNX16P57768 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX16P57768 RN7SL828P-201ENST00000607615 303 ntBASIC16.92■□□□□ 0.3
SNX16P57768 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX16P57768 KRT8P37-201ENST00000451609 1420 ntBASIC16.92■□□□□ 0.3
SNX16P57768 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX16P57768 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNX16P57768 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.92■□□□□ 0.3
SNX16P57768 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SNX16P57768 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX16P57768 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
SNX16P57768 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SNX16P57768 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX16P57768 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX16P57768 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.92■□□□□ 0.3
SNX16P57768 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNX16P57768 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNX16P57768 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SNX16P57768 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SNX16P57768 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 AC134407.2-201ENST00000625089 1978 ntBASIC16.91■□□□□ 0.3
SNX16P57768 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SNX16P57768 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SNX16P57768 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 BNIP3P1-202ENST00000550043 1585 ntBASIC16.91■□□□□ 0.3
SNX16P57768 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SNX16P57768 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX16P57768 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.91■□□□□ 0.3
SNX16P57768 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX16P57768 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX16P57768 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX16P57768 GPALPP1-207ENST00000611650 899 ntBASIC16.91■□□□□ 0.3
SNX16P57768 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX16P57768 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX16P57768 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SNX16P57768 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SNX16P57768 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX16P57768 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
SNX16P57768 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.9■□□□□ 0.3
SNX16P57768 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SNX16P57768 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SNX16P57768 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SNX16P57768 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SNX16P57768 FO393414.2-201ENST00000405153 598 ntBASIC16.9■□□□□ 0.3
SNX16P57768 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX16P57768 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX16P57768 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX16P57768 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX16P57768 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX16P57768 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX16P57768 AC015911.4-201ENST00000588022 1070 ntBASIC16.9■□□□□ 0.3
SNX16P57768 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SNX16P57768 AL136982.4-201ENST00000437689 1740 ntBASIC16.9■□□□□ 0.3
SNX16P57768 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNX16P57768 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX16P57768 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX16P57768 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SNX16P57768 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX16P57768 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SNX16P57768 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.3
SNX16P57768 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms