Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CMC4P56277 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.93□□□□□ -0.5
CMC4P56277 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CMC4P56277 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CMC4P56277 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.92□□□□□ -0.5
CMC4P56277 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CMC4P56277 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CMC4P56277 BTBD7P1-201ENST00000447253 1453 ntBASIC11.92□□□□□ -0.5
CMC4P56277 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.92□□□□□ -0.5
CMC4P56277 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CMC4P56277 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.92□□□□□ -0.5
CMC4P56277 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.92□□□□□ -0.5
CMC4P56277 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.92□□□□□ -0.5
CMC4P56277 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 AC093512.1-201ENST00000617969 520 ntBASIC11.92□□□□□ -0.5
CMC4P56277 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 AL033527.5-202ENST00000641632 1098 ntBASIC11.92□□□□□ -0.5
CMC4P56277 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CMC4P56277 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CMC4P56277 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC11.92□□□□□ -0.5
CMC4P56277 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CMC4P56277 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CMC4P56277 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CMC4P56277 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.91□□□□□ -0.5
CMC4P56277 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 AC005052.1-201ENST00000625181 2492 ntBASIC11.91□□□□□ -0.5
CMC4P56277 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CMC4P56277 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CMC4P56277 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.91□□□□□ -0.5
CMC4P56277 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.91□□□□□ -0.5
CMC4P56277 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 TREML5P-201ENST00000421694 576 ntBASIC11.91□□□□□ -0.5
CMC4P56277 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.91□□□□□ -0.5
CMC4P56277 CYMP-203ENST00000474680 1263 ntBASIC11.91□□□□□ -0.5
CMC4P56277 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 ZNF890P-202ENST00000530367 1156 ntBASIC11.91□□□□□ -0.5
CMC4P56277 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.91□□□□□ -0.5
CMC4P56277 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.91□□□□□ -0.5
CMC4P56277 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.91□□□□□ -0.5
CMC4P56277 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.91□□□□□ -0.5
CMC4P56277 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.91□□□□□ -0.5
CMC4P56277 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.91□□□□□ -0.5
CMC4P56277 AC011467.4-201ENST00000594891 528 ntBASIC11.91□□□□□ -0.5
CMC4P56277 AL138828.2-201ENST00000615812 383 ntBASIC11.91□□□□□ -0.5
CMC4P56277 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms