Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NUBP1P53384 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.01■□□□□ 0.15
NUBP1P53384 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.01■□□□□ 0.15
NUBP1P53384 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.01■□□□□ 0.15
NUBP1P53384 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC16.01■□□□□ 0.15
NUBP1P53384 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC16.01■□□□□ 0.15
NUBP1P53384 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.01■□□□□ 0.15
NUBP1P53384 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC16.01■□□□□ 0.15
NUBP1P53384 NREP-217ENST00000509025 987 ntTSL 3 BASIC16.01■□□□□ 0.15
NUBP1P53384 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC16.01■□□□□ 0.15
NUBP1P53384 Metazoa_SRP.26-201ENST00000547793 284 ntBASIC16.01■□□□□ 0.15
NUBP1P53384 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.01■□□□□ 0.15
NUBP1P53384 AC107905.1-201ENST00000616204 426 ntBASIC16.01■□□□□ 0.15
NUBP1P53384 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
NUBP1P53384 AL139011.1-202ENST00000642063 584 ntBASIC16.01■□□□□ 0.15
NUBP1P53384 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NUBP1P53384 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NUBP1P53384 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 ODCP-201ENST00000459650 1639 ntBASIC16.01■□□□□ 0.15
NUBP1P53384 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NUBP1P53384 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 AC004408.2-201ENST00000623613 2777 ntBASIC16■□□□□ 0.15
NUBP1P53384 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16■□□□□ 0.15
NUBP1P53384 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16■□□□□ 0.15
NUBP1P53384 CD8B2-202ENST00000417670 633 ntBASIC16■□□□□ 0.15
NUBP1P53384 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16■□□□□ 0.15
NUBP1P53384 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC16■□□□□ 0.15
NUBP1P53384 HOMER2P2-201ENST00000451621 847 ntBASIC16■□□□□ 0.15
NUBP1P53384 IMP3P2-201ENST00000489760 475 ntBASIC16■□□□□ 0.15
NUBP1P53384 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AC126915.1-201ENST00000522847 1038 ntBASIC16■□□□□ 0.15
NUBP1P53384 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AC091515.1-201ENST00000548110 679 ntBASIC16■□□□□ 0.15
NUBP1P53384 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16■□□□□ 0.15
NUBP1P53384 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16■□□□□ 0.15
NUBP1P53384 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16■□□□□ 0.15
NUBP1P53384 AF117829.2-201ENST00000619538 361 ntBASIC16■□□□□ 0.15
NUBP1P53384 AC132938.4-201ENST00000623835 848 ntBASIC16■□□□□ 0.15
NUBP1P53384 AC005252.2-201ENST00000624630 1141 ntBASIC16■□□□□ 0.15
NUBP1P53384 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16■□□□□ 0.15
NUBP1P53384 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NUBP1P53384 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NUBP1P53384 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NUBP1P53384 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.99■□□□□ 0.15
NUBP1P53384 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NUBP1P53384 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.99■□□□□ 0.15
NUBP1P53384 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.99■□□□□ 0.15
NUBP1P53384 TNXA-203ENST00000507684 2038 ntBASIC15.99■□□□□ 0.15
NUBP1P53384 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms