Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDX1P52945 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDX1P52945 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
PDX1P52945 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.55■□□□□ 0.08
PDX1P52945 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.54■□□□□ 0.08
PDX1P52945 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PDX1P52945 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDX1P52945 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDX1P52945 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.54■□□□□ 0.08
PDX1P52945 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.54■□□□□ 0.08
PDX1P52945 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.54■□□□□ 0.08
PDX1P52945 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 AC099568.2-201ENST00000609194 695 ntBASIC15.54■□□□□ 0.08
PDX1P52945 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.54■□□□□ 0.08
PDX1P52945 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDX1P52945 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDX1P52945 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
PDX1P52945 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PDX1P52945 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PDX1P52945 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
PDX1P52945 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PDX1P52945 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.53■□□□□ 0.08
PDX1P52945 MIR1909-201ENST00000411312 80 ntBASIC15.53■□□□□ 0.08
PDX1P52945 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.53■□□□□ 0.08
PDX1P52945 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.53■□□□□ 0.08
PDX1P52945 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.53■□□□□ 0.08
PDX1P52945 AC112492.5-201ENST00000421897 457 ntBASIC15.53■□□□□ 0.08
PDX1P52945 RN7SL837P-201ENST00000463010 287 ntBASIC15.53■□□□□ 0.08
PDX1P52945 ELK1P1-201ENST00000485699 580 ntBASIC15.53■□□□□ 0.08
PDX1P52945 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 SDHAP3-202ENST00000515467 728 ntBASIC15.53■□□□□ 0.08
PDX1P52945 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.53■□□□□ 0.08
PDX1P52945 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 TPRX2P-201ENST00000535362 881 ntBASIC15.53■□□□□ 0.08
PDX1P52945 AC106886.1-201ENST00000568660 600 ntBASIC15.53■□□□□ 0.08
PDX1P52945 CTBP2P3-201ENST00000585629 1255 ntBASIC15.53■□□□□ 0.08
PDX1P52945 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PDX1P52945 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.53■□□□□ 0.08
PDX1P52945 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.53■□□□□ 0.08
PDX1P52945 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDX1P52945 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.53■□□□□ 0.08
PDX1P52945 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PDX1P52945 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms